Jules J. Berman, Ph.D., M.D., Miscellaneous Works

<body bgcolor="#ffffff" text="#000000" link="#0000ff" vlink="#0000ff" alink="#ff0000"> <H2>Professional Miscellanea, Jules J. Berman, Ph.D., M.D.</H2> See <a href="http://www.julesberman.info/pubs.htm" target = "_top" > <b>Publications Page</b></a> for a list of all published papers, with links to many of the full-text documents. <h4>Recent meetings attended or presented</h4> <ol> <li> NCI Specimen Resources Committee Meeting, Holiday Inn Bethesda, Bethesda, Maryland, <br>Invited speaker: Informatics in support of Specimen Resources, Jan 13, 1999. <br><br><li> 1999 Health Information Infrastructure (HII99) Conference. Improving Health in a Digital World, Renaissance Washington Hotel, Washington, D.C., April 26-28, 1999. <br><br><li> Internet2 Spring Members Meeting, Non-member observer, Washington, D.C., April 28, 1999. <br><br><li> Translating Comprehensive Molecular Technologies to the Clinic: Issues and Barriers, Rockville, MD, May 6-7, 1999. <br><br><li> Cooperative Breast Cancer Tissue Resource group meeting: Jackson Memorial Hospital, Miami, Florida, Feb 4-5, 1999. <br><br><li> Basic Project Officer Training, with Honors Commendation, Rockville, MD, March 8-11, 1999. <br><br><li> Invited Lecture: "Informatics Issues Related to Pathology Practice," Department of Pathology, Washington Hospital Center, Washington, D.C., April 26, 1999. <br><br><li> College of American Pathologists Conference. Solid Tumor Prognostic Factors: which, how, and so what?" Westin Hotel, Chicago, Illinois, Jun 10-13, 1999. <br><br><li> NCI Specimen Resources Committee meeting. Speaker: "Informatics for Pathology Based Specimen Resources," Double Tree Hotel, Rockville, MD, July 15, 1999. <br><br><li> Association of Pathology Chairs, Boulder, Colorado, <br>Invited speaker: "NCI activities in pathology informatics," July 21-23, 1999. <br><br><li> Cooperative Breast Cancer Tissue Resource site visit: Sugarloaf Conference Center, 9230 Germantown Ave., Philadelphia, PA 19118 Aug. 26-27, 1999. <br><br><li> Symposium - Detection of HER2/neu (erbB2) Antigen overexpression Bethesda Marriott, Bethesda, MD, Oct 7-8, 1999. <br><br><li> APIII Advancing Pathology Informatics: Imaging and the Internet, Marriott City Center, Pittsburgh, PA, <br>Invited speaker: "Automatic Indexing of a Pathology Image Archive using UMLS," October 14-16, 1999. <br><br><li> Conference on Confidentiality, Data Security and Cancer Research: Best Practices Workshop. Renaissance Hotel, Washington, D.C., October 20, 1999. <br><br><li> SNOMED Users' Group Conference, Omni Shoreham Hotel, Washington, D.C., November 5, 1999. <br><br><li> NCI Working Group Meeting on Tissue Microarrays, DoubleTree Hotel, Rockville, MD, Dec 16-17, 1999. <br><br><li> SNOMED RT Vendor - End User Open Dialogue, New Orleans Hilton Riverside, March 25, 2000. <br><br><li> U.S.-Canadian Academy of Pathology Meeting, New Orleans Hilton Riverside Hotel, March 26-28, 2000. <br><br><li> Leukemia Vocabulary Meeting, Sponsored by the Mouse Models of Human Cancers Consortium, Doubletree Hotel, Rockville, MD, June 9, 2000. <br><br><li> NCI SPORE Intergroup Common Data Element Meeting. Westfields Marriott, Chantilly, Virginia. <br>Invited speaker: "CDEs and the Shared Pathology Informatics Network," July 8-9, 2000. <br><br><li> Association of Pathology Chairs, Boulder, Colorado. <br>Invited speaker: "Pathology information, privacy, and research progress - Are they compatible?", July 26-28, 2000. <br><br><li> Health Informatics Standards Board (HISB). Non-member observer, Arlington, VA, September 7, 2000. <br><br><li> University of Illinois at Chicago, Department of Pathology. <br>Invited speaker: "Confidentiality issues and models for Pathology Research," September 25, 2000. <br><br><li> Early Detection Research Network First Annual Scientific Workshop, Chicago, Illinois <br>Invited Speaker: "Sharing Pathology Data: Confidentiality and Data Representation Issues," September 26-27, 2000. <BR><A HREF="http://www.julesberman.info/edrn.htm" target = "_top" >Abstract</A> <br><br><li> NCI Mouse Models of Human Cancers Consortium. Workshop on the Classification of Hematopoietic Neoplasms of the Mouse. Rockville, MD, Oct 11, 2000 <br><br><li> Emerging Opportunities in Prostate Cancer Epidemiology. National Cancer Institute. Washington, D.C., Oct. 12-13, 2000 <br><br><li> 2000 ASCP/CAP Annual Meeting, San Diego, CA. Invited workshop speaker: "Data Mining and Data Warehousing," Oct 17, 2000. <BR><A HREF="http://www.julesberman.info/sa35b2.htm" target = "_top" >Full Text of Handout</A> <BR><A HREF="http://www.julesberman.info/sandiego.ppt" target = "_top" >PowerPoint Presentation</A> <br><br><li> Advancing Pathology Informatics and the Internet (APIII), Pittsburgh, PA. Invited workshop speaker: "Anatomic Pathology Data Mining," Oct 27, 2000. <BR><A HREF="http://www.julesberman.info/berman_1.ppt" target = "_top" >PowerPoint Presentation</A> <br><br><li> Universities Associated for Research and Education in Pathology (UAREP). In conjunction with Advancing Pathology Informatics and the Internet (APIII), Pittsburgh, PA. Invited focus session speaker: "Bioinformatics Data: Confidentiality Issues," Oct 27, 2000. <BR><A HREF="http://www.julesberman.info/berman_2.ppt" target = "_top" >PowerPoint Presentation</A> <br><br><li> A Molecular Classification for Precancerous Lesions Report of an EDRN (Early Dectection Research Network) Working Group Meeting Summary February 1-2, 2001, Rockville, Maryland <br>Invited Speaker: "Informatics Opportunities for a Molecular Taxonomy of Precancer," <BR><A HREF="http://prevention.cancer.gov/files/news-events/20010201-2.pdf" target = "_top" >Meeting Document</A> <BR><A HREF="http://www.julesberman.info/precan.htm" target = "_top" >Precancer Terms</A> <br><br><li> Confidential Health Information and the Public Good: Balancing Needs and Priorities. A Roundtable for the Pfizer Journal. Pointe Hilton Tapatio Cliffs Resort, Phoenix, Arizona, Feb 22-23, 2001. The meeting summary was reported in,  The Pfizer Journal. Perspectives on Health Care and Biomedical Research: Balancing Medical Innovation and Patient Confidentiality,  editor SJ Giorgianni. Volume 5, number 3, 2001. <br><br><li> Early Lung Cancer Screening Workshop National Cancer Institute / American Cancer Society. Attendee. March 7-8, 2001, Rockville, MD. <br><br><li> Invited Speaker: "Sharing Large Pathology Datasets." Pathology Grand Rounds, Department of Pathology, East Carolina University School of Medicine, Greenville, North Carolina, April 9, 2001. <br><br><li> Informatics Committee, College of American Pathologists. Attendee. May 4-5, 2001, Chicago, IL. <br><br><li> 19th Annual Automated Information Management in the Clinical Laboratory (AIMCL) Symposium. Invited Speaker for the Tissue Microarray (TMA) Infostructure Workshop. May 30, 2001, Ann Arbor, MI. <BR><A HREF="http://www.julesberman.info/mich.ppt" target = "_top" >PowerPoint Presentation</A> <BR><A HREF="http://www.julesberman.info/tmasum.htm" target = "_top" >First TMA Workshop Summary</A> <br><br><li> APIII 2001, Advancing Pathology Informatics, Imaging and the Internet," Chair of breakout session B3 entitled, "Practical Solutions to Confidentiality Issues and IRB Requirements in Pathology Research: Lessons for Pathologists, Tissue Bankers, and Data Archivists," October 5, 2001, Pittsburgh, PA. <BR><A HREF="http://www.julesberman.info/confapi.htm" target = "_top" >Full Text of Discussion Hand-out</A> <br><br><li> NCI Enterprise Vocabulary System Vocabulary Executive Board Quarterly Meeting. April 3, 2002. Invited speaker. <BR><A HREF="http://www.julesberman.info/openvoca.pdf" target = "_top" >Presentation, PDF file</A> <br><br><li> APIII 2001, Advancing Pathology Informatics, Imaging and the Internet," Moderator and break-out session co-chair for Tissue Microarray Data Exchange Standards Workshop, October 6, 2001, Pittsburgh, PA. <BR><A HREF="http://www.julesberman.info/tma10_6.htm" target = "_top" >Second TMA Workshop Summary</A> <br><br><li> Community Standards for Publication-Related Data and Materials. Feb. 25, 2002, National Academy of Sciences. Washington, D.C. <br><br>This workshop resulted in UPSIDE (Universal Principle of Sharing Integral Data Expeditiously), explained in the NAS publication,<a href="http://books.nap.edu/books/0309088593/html/R1.html" target = "_top" > Sharing Publication-Related Data and Materials: Responsibilities of Authorship in the Life Sciences (2003).</a> See Acknowledgement page (xi) for list of conference contributors. <br><br><li> Clinical Information System / Life science Roundtable, Cerner Vision Center, April 9-10, 2002, Kansas City, Missouri <br><br><li> International Symposium on Antimutagenesis and Anticarcinogenesis, New York Medical College, April 26-27, 2002, Valhalla, New York. <br><br><li> 20th Annual Automated Information Management in the Clinical Laboratory (AIMCL) Symposium. <br>May 22-24, 2002, Ann Arbor, MI. <ul> <br><li>Invited Speaker: Confidentiality and Privacy of Lab Data: An IRB Perspective. <BR><A HREF="http://www.julesberman.info/jbaimcl.ppt" target = "_top" >Powerpoint Presentation</A> <br><li>Roundtable discussant: The NCI-Supported Shared Pathology Informatics Network (SPIN): Secure Web-Based Searching of Heterogeneous De-identified Pathology Data at Multiple Institutions <br><li>Workshop faculty: The Tissue Microarray (TMA) Infostructure: Planning, Development, and Data Exchange. </ul> <br><li> Sarcoma State of the Science: Building on Molecular and Clinical Progress, June 17-18, 2002, Bethesda, Marriott <BR><A HREF="http://www.webtie.org/sots/Meetings/Sarcoma/06-17-2002/Default.htm" target = "_top" >Recommendations</a> <br><br><li> APIII 2002, Advancing Pathology Informatics Imaging and the Internet, October 2-4, 2002, Pittsburgh, Pennsylvania <br>Invited speaker: Perl workshop. <br>Oct 3, 2002. Programming for Informatics: Why Should I learn to program? <br>Oct 4, 2002. Programming for Informatics: Perl Programming Tutorial - Tools for Pathology Informatics  <br><br><li> National Dialogue on Cancer (NDC) Research Team "Tissue Access Working Group Meeting," January 7, 2003, Hyatt Regency Capitol Hill, Washington, D.C. <br><br><li> C-Kit Meeting. College of American Pathologists. Feb. 5, 2002. 1350 I Street, Washington, D.C. <br><br><li> Invited Speaker: The Tissue Microarray Data Exchange Specification. For: Specimen Processing Workshop. Sponsored by the Epidemiology and Carcinogenesis faculty, NCI. February 24, 2003, Rockville, MD. <br><a href="http://www.julesberman.info/tmastand.htm" target = "_top" >Lecture Notes</a> <br><br><li> Invited speaker. Health Sciences Informatics Research-in-Progress Seminar. Johns Hopkins University Medical Institutions, March 7, 2003, Johns Hopkins Hospital, Meyer B-105, Baltimore, MD. <BR><A HREF="http://www.julesberman.info/jb3-7-03.ppt" target = "_top" >PowerPoint Presentation</a> <br><br><li> Non-Invasive Autopsy Workshop. March 12-13, 2003, Neurosciences Building, NCI, NIH, Rockville, Maryland. <br><br><li> Open Source for National and local eGovernment Programs in the U.S. and European Union, March 17-19, 2003, The George Washington University, Washington, D.C. <BR><A HREF="http://www.julesberman.info/egov.htm" target = "_top" >Abstract</a> <BR><A HREF="http://www.julesberman.info/jbopen.ppt" target = "_top" >PowerPoint Presentation</a> <br><br><li> U.S.-Canadian Academy of Pathology. March 22-28, 2003, Washington, D.C. <BR><A HREF="http://www.julesberman.info/cpctr1.htm" target = "_top" >Abstract 1 text</A> <BR><A HREF="http://www.julesberman.info/cpctr2.htm" target = "_top" >Abstract 2 text</A> <br><br><li> Standards in pathology informatics and experimental pathology (lecture). To be presented in the "Mining Datasets" session of Experimental Biology: Translating the Genome, 2004. Washington, D.C. April 17, 2004. <BR><A HREF="http://www.julesberman.info/jules_eb.ppt" target = "_top" >PowerPoint Presentation</A> <br><br><li> Tissue Microarray Data Exchange Specification (lecture). Microarrays in Medicine, Cambridge Health Institute (CHI), April 26-27, 2004, Boston MA. <BR><A HREF="http://www.julesberman.info/chijules.ppt" target = "_top" >PowerPoint Presentation</A> <br><br><li> What is pathology informatics? Massachusetts General Hospital Pathology Grand Rounds, May 20, 2004. <br><br><li> Opportunities and Rewards for Pathology Data Sharing. Associationfor Pathology Chairs (APC/PRODS/PDAS/GRIPE) Annual summer meeting. July 23, 2004, Mont-Tremblant, Quebec, Canada. <BR><A HREF="http://www.julesberman.info/julesapc.ppt" target = "_top" >Supplemental files</A> <br><br><li> Sharing, merging and querying pathology data. ASCP teleconference. October 27, 2004. <BR><A HREF="http://www.julesberman.info/ascp.htm" target = "_top" >Outline of discussion</A> <BR><A HREF="http://www.julesberman.info/ascp_jb.ppt" target = "_top" >Powerpoint presentation</A> <br><br><li> Pathology data sharing. United States Military Cancer Institute (USMCI), Walter Reed Army Medical Center (WRAMC), Washington, D.C., November 16, 2004. <BR><A HREF="http://www.julesberman.info/usmci.ppt" target = "_top" >Powerpoint presentation</A> <br><br><li> The Development of Imaging Standards for Pathology (lecture). Lab InfoTech Summit. March 2-4, 2005. Venetian Hotel, Las Vegas, Nevada. <BR><A HREF="http://www.julesberman.info/jbinfsum.ppt" target = "_top" >Powerpoint Presentation</a> <br><br><li> Invited panelist: President's Cancer Panel. Assessing progress, advancing change: Challenges in Cancer Survivorship. Washington, D.C., Aug. 25, 2005. <BR><A HREF="http://deainfo.nci.nih.gov/ADVISORY/pcp/pcp0805/agenda25aug05.pdf" target = "_top" >Agenda</a> <br><br><li> Modern Neoplasm Classification (lecture). Department of Pathology. University of Maryland. Baltimore, Maryland. October 12, 2005. <BR><A HREF="http://www.julesberman.info/um4.ppt" target = "_top" >PowerPoint Presentation</a> <br><br><li> Modern Neoplasm Classification (lecture). Department of Pathology. University of Michigan. Ann Arbor, Michigan. October 27, 2005. <BR><A HREF="http://www.julesberman.info/um4.ppt" target = "_top" >PowerPoint Presentation</a> <br><br><li> Shared Pathology Informatics Network Meeting (Consultant). Boston MA. January 23, 2006. <br><br><li> Lab InfoTech Summit. March 1-3, 2006. Venetian Hotel, Las Vegas, Nevada. <br><br><li> Advancing Practice, Instruction and Innovation through Informatics (APIII) 2004, August 15-18, 2006, Vancouver, British Columbia. <br> <br> Informatics Laboratory Digital Imaging Project, Session F2, Friday, August 18, 2006, 10:30 A.M. to noon <BR><A HREF="http://www.julesberman.info/ldip_f2.ppt" target = "_top" >Powerpoint demonstration</a> <br> <br> API Imaging Working Group Thursday, August 17, 2006 11:30 A.M. To 1:00 P.M. <BR><A HREF="http://www.julesberman.info/api_wkgp.ppt" target = "_top" >Powerpoint demonstration</a> <br> <br>Imaging white paper <BR><A HREF="http://www.julesberman.info/jjb_gwm.pdf" target = "_top" >PDF document</a> <br><br><li> caBIG 2007 Annual Meeting. Panelist, "Digital Imaging: How It Relates to Pathology." Tuesday, February 6, 2007, Marriott Wardman Park Hotel, Washington, D.C. <BR><A HREF="http://www.julesberman.info/jb_cabig.ppt" target = "_top" >Powerpoint demonstration</a> <br><br><li> Han-Mo Koo Seminar, April 25, 2007. "The Evils of Complexity." Van Andel Research Institute, Grand Rapids, Michigan. <BR><A HREF="http://www.julesberman.info/jb_4257.ppt" target = "_top" >Powerpoint demonstration</a> <br><br><li> Advancing Practice, Instruction and Innovation through Informatics (APIII) 2007, September 9-12, 2007, Pittsburgh, PA. <br> <br> Monday, September 10, 2007, 7:30 am - 8:30 am <br> Implementing an RDF Schema for Pathology Images, From the Association for Pathology Informatics</b> <br><a href="http://www.julesberman.info/spec2img.htm" target = "_top" >White paper (about 45 pages)</a>  <br> <br> Tuesday, September 11, 2007, 11:30 am - 12:30 pm <br> Book Publishing in Biomedical Informatics  <BR><A HREF="http://www.julesberman.info/jb_pub.ppt" target = "_top" >Powerpoint demonstration</a> <br><br><li> Invited speaker. 2008 ISBER Annual Meeting. Special session: Informatics for Repositories: How Pathology's Data and Clinical Tissue Flow Can be Harnessed to the Mission of Biospecimen Repositories. Talk title: Informatics Open Source Tools for Tissue Banking and Annotation. Wednesday, May 21, 2008. Bethesda North Marriott Hotel, 5701 Marinelli Road, Bethesda, Maryland 20852 <BR><A HREF="http://www.julesberman.info/repos.ppt" target = "_top" >Powerpoint demonstration</a> <br><br><li> Invited panelist for the U.S. Office of Civil Rights (HHS), Workshop on the HIPAA Privacy Rule's De-identification Standard, March 8-9, 2010, Washington, D.C. <BR><A HREF="http://www.julesberman.info/factoids/ocr_deid.pdf" target = "_top" >Meeting Agenda</a> <BR><A HREF="http://www.julesberman.info/factoids/ocrstate.pdf" target = "_top" >Post-Meeting Statement</a> <BR><A HREF="http://www.julesberman.info/factoids/paneljjb.ppt" target = "_top" >Meeting Powerpoint Presentation</a> <br><br><hr> <b>Workshops organized</b> <br><br><li> Pathology informatics in support of specimen-based cancer research. May 13-14, 1999, Annapolis, Maryland. <BR><A HREF="http://www.julesberman.info/aaconf33.htm" target = "_top" >Agenda</A> <BR><A HREF="http://www.julesberman.info/aawks4.htm" target = "_top" >Workshop Summary</A> <br><br><li> GastroIntestinal Stromal Tumors (GIST). Co-hosted by The Office of Rare Diseases, NIH, and the Armed Forces Institute of Pathology (AFIP). Organizers: Dr. Jules Berman and Dr. Timothy O'Leary. April 2-3, 2001, Bethesda, MD. <BR><A HREF="http://www.julesberman.info/gist_app.htm" target = "_top" >November 29, 1999 application for funding for GIST Workshop</A> <BR><A HREF="http://www.julesberman.info/gist_sum.htm" target = "_top" >GIST Workshop Summary</A> <BR><A HREF="http://www.julesberman.info/oleary2.htm" target = "_top" >Introduction, GIST Workshop Papers</A> <br><br><li> <b>Berman JJ</b>. Programming for pathology informatics: Perl programming tutorial - Tools for pathology informatics. Advancing Pathology Informatics, Imaging and the Internet, Pittsburgh, PA, Friday, October 4, 2002.  <br><br><li> Pathology Workshop on Borderline Ovarian Tumors. Sponsored by the NIH Office of Rare Diseases and the NIH Office of Women's Health. Held in the Bethesda Hyatt Regency Hotel, August 27-28, 2003. Co-chaired with Steven Silverberg, Department of Pathology, University of Maryland Medical Center. <BR><A HREF="http://www.julesberman.info/bot.htm" target = "_top" >Awarded application</A> <BR><A HREF="http://www.julesberman.info/agenda2.htm" target = "_top" >Agenda</A> <BR><A HREF="http://www.julesberman.info/intro2.ppt" target = "_top" >PowerPoint Presentation</A> <br><a href="http://www.julesberman.info/botber.pdf" target = "_top" >Full-text document</a> <br><a href="http://www.uic.edu/depts/mcpt/anatomic/" target = "_top" >Web atlas</a>  <br><br><li> Advancing Practice, Instruction and Innovation through Informatics (APIII) 2003, October 7-9, 2003, Pittsburgh, Pennsylvania <br>Organizer and speaker: Perl/Python XML workshop. <BR><A HREF="http://www.julesberman.info/perlpy.htm" target = "_top" >Short Workshop Description</a> <BR><A HREF="http://www.julesberman.info/apixml.htm" target = "_top" >Workshop Handout</a>  <br><a href="http://www.julesberman.info/perlxml.ppt" target = "_top" >PowerPoint Presentation</a> <br><br><li> Advancing Practice, Instruction and Innovation through Informatics (APIII) 2004, October 6-8, 2004, Pittsburgh, Pennsylvania. <br>Co-Organizer and speaker: API Working Group Session: Open Discussion of Pathology Digital Imaging Standards. <BR><A HREF="http://www.julesberman.info/apildip.ppt" target = "_top" >Powerpoint Presentation</a> <br><br><li> Precancer Workshop. Sponsored by The Division of Cancer Biology, National Cancer Institute, and by the George Washington University. November 8-9, 2004. Marvin Center, George Washington University, Washington, D.C. <BR><A HREF="http://www.julesberman.info/prec.ppt" target = "_top" >Powerpoint Presentation</a> <BR><A HREF="http://www.julesberman.info/coverpre.doc" target = "_top" >Statement of purpose</a> <BR><A HREF="http://www.julesberman.info/breakout.txt" target = "_top" >Discussion questions</a> <BR><A HREF="http://www.julesberman.info/pre_agen.doc" target = "_top" >Agenda</a> <BR><A HREF="http://www.julesberman.info/pre_rost.txt" target = "_top" >Roster</a> <br> <HR> <b>Published federal announcements/public documents</b> <br><br><li> Request for Application CA-99-012, "Cooperative prostate cancer tissue resource," April 29, 1999 <BR><A HREF="http://www.julesberman.info/pros_rfa.htm" target = "_top" >Text of RFA</A> <br><br><li> Request for Application CA-01-006, "Shared Pathology Informatics Network", March 27, 2000 <BR><A HREF="http://www.julesberman.info/infocon.htm" target = "_top" >Concept, Nov. 9, 1999</A> <BR><A HREF="http://www.julesberman.info/spincon.htm" target = "_top" >Text of RFA</A> <BR><A HREF="http://www.julesberman.info/preapp.htm" target = "_top" >Pre-Application Meeting Notice, May 4, 2000</A> <BR><A HREF="http://www.julesberman.info/spintran.htm" target = "_top" >Pre-Application Meeting Transcript, May 22, 2000</A> <br> <br> <hr> <b>Web sites/software with contributions from Jules Berman</b> <br><br>  <li><a href="http://www.julesberman.info/http://www.ifer.org" target = "_top" > International Foundation for Ethical Research</a> <li><a href="http://www.julesberman.info/misspell.htm" target = "_top" >Pathologic Spelling</a> <li><a href="http://www.julesberman.info/preclass.htm" target = "_top" >Precancer draft paper</a> <li><a href="http://www.julesberman.info/presum.htm" target = "_top" >Precancer terms - meta data</a> <li><a href="http://www.julesberman.info/omimprec.htm" target = "_top" >Inherited cancer syndrome list</a> <li><a href="http://www.julesberman.info/ca_topo.htm" target = "_top" >Tumor Sites: Recommendations</a> <li><a href="http://www.julesberman.info/abbtwo.htm" target = "_top" > Abbreviations and Acronyms Page </a> <li><a href="http://www.julesberman.info/TRFAQ.htm" target = "_top" > Assoc. for Pathology Informatics Call for Technical Reports (FAQ)</a> <br> <br> <hr> <b>Tissue micro array (tissue array, tissue microarray) data exchange project</b> <br><br> <li><A href="http://www.julesberman.info/tmasum.htm" target = "_top" >Summary of 1st TMA workshop</a> <li><A href="http://www.julesberman.info/tma10_6.htm" target = "_top" >Summary of 2nd TMA workshop</a> <li><A HREF="http://www.julesberman.info/api-tma.htm" target = "_top" >Tissue Microarray Data Standard first draft</A> <li><A HREF="http://www.julesberman.info/tmadtd2.htm" target = "_top" >Tissue Microarray Data Standard second draft</A> <li><A HREF="http://www.julesberman.info/tmafaqv1.htm" target = "_top" >First Tissue Micro array Data Standards FAQ</A> <li><A HREF="http://www.julesberman.info/tmafaqv2.htm" target = "_top" >Second Tissue Micro array Data Standards FAQ</A> <li><A HREF="http://www.julesberman.info/validtma.txt" target = "_top" >Validating Perl script</A> <li><A HREF="http://www.julesberman.info/tma_cde.htm" target = "_top" >Tissue Micro-Array Common Data Elements (CDEs)</A> <li><A HREF="http://www.biomedcentral.com/1472-6947/3/5" target = "_top" >TMA Specification article (BMC Med. Inform. Dec. Making)</A> <li><A HREF="http://www.biomedcentral.com/1471-2105/5/19" target = "_top" >TMA Implementation article (BMC Bioinformatics)</A> <br> <br> <hr> <H3>LABORATORY DIGITAL IMAGING PROJECT DOCUMENTS</H3> <br> <br> <li><a href="http://www.julesberman.info/spec2img.htm" target = "_top" > Implementing an RDF Schema for Pathology Images (September 10, 2007) </a> <li><a href="http://www.julesberman.info/ldip_cde.txt" target = "_top" > Instructions for submitting CDEs to LDIP [May 8, 2006, ldip_cde.txt] </a> <li><a href="http://www.julesberman.info/4-28-06.txt" target = "_top" > Minutes of April 28, 2006 LDIP Conference Call [4-28-06.txt] </a> <li><a href="http://www.julesberman.info/03-31-06.txt" target = "_top" > Minutes of the March 31, 2006 LDIP Conference Call [03-31-06.txt] </a> <li><a href="http://www.julesberman.info/2-24-06.txt" target = "_top" > Minutes of the February 24, 2006 LDIP Conference Call [2-24-06.txt] </a> <li><a href="http://www.julesberman.info/1-27-06.txt" target = "_top" > Minutes of the January 27, 2006 LDIP Conference Call [1-27-06.txt] </a> <li><a href="http://www.julesberman.info/12-30-05.txt" target = "_top" > Minutes of the December 30, 2005 LDIP Conference Call [12-30-05.txt] </a> <li><a href="http://www.julesberman.info/9-30-05.txt" target = "_top" > Minutes of the September 30, 2005 LDIP Conference Call [9-30-05.txt] </a> <li><a href="http://www.julesberman.info/ldip.xml" target = "_top" > First (and very preliminary) draft of RDF namespace for LDIP, adapted from OME (Open Microscopy Environment) [ldip.xml] </a> <li><a href="http://www.julesberman.info/7-29-05.txt" target = "_top" > Minutes of the July 29, 2005 LDIP Conference Call </a> <li><a href="http://www.julesberman.info/6-24-05.txt" target = "_top" > Minutes of the June 24, 2005 LDIP Conference Call [6-24-05.txt] </a> <li><a href="http://www.julesberman.info/jbinfsum.ppt" target = "_top" > Dr. Jules Berman's presentation at the API session of Laboratory InfoTech Summit in Las Vegas (March 4, 2005) </a> <li><a href="http://www.julesberman.info/ldipmin7.rtf" target = "_top" > Minutes of the Feb. 25, 2005 LDIP Conference Call </a> <li><a href="http://www.julesberman.info/ldipmin6.rtf" target = "_top" > Minutes of the January 28, 2005 LDIP Conference Call </a> <li><a href="http://www.julesberman.info/ldipmin5.rtf" target = "_top" > Minutes of the December 17, 2004 LDIP Conference Call </a> <li><A HREF="http://www.julesberman.info/jb_blog.rtf" target = "_top" > LDIP Blog for Lab IntoTech Summit, December 7, 2004, by Berman JJ and Friedman BA </a> <li><a href="http://www.julesberman.info/ldipmin4.rtf" target = "_top" > Minutes of the November 19, 2004 LDIP Conference Call </a> <li><a href="http://www.julesberman.info/va_dicom.rtf" target = "_top" > Minutes of the November 2, 2004 LDIP Conference Call with the Veterans Administration DICOM implementers </a> <li><a href="http://www.julesberman.info/ldipmin3.rtf" target = "_top" > Minutes of the October 29, 2004 LDIP Conference Call </a> <li><a href="http://www.julesberman.info/ldiptask.rtf" target = "_top" > Draft of LDIP task document (Updated October 29, 2004) </a> <li><a href="http://www.julesberman.info/ldipmin2.rtf" target = "_top" > Minutes of second LDIP open workshop (October 6, 2004) </a> <li><a href="http://www.julesberman.info/ldip_jb.ppt" target = "_top" > Dr. Jules Berman's presentation at APIII LDIP open workshop (October 6, 2004) </a> <li><a href="http://www.julesberman.info/lcharter.rtf" target = "_top" > LDIP Charter document (draft revised January 25, 2005) </a> <li><a href="http://www.julesberman.info/ldipmin1.rtf" target = "_top" > Minutes of first LDIP Conference Call (May 3, 2004) </a> <br> </ul> <br><br>  <hr> <b>Press Interviews</b> <br><br> <li>Eric Skjei. CAP Today Feature Story. <br><A HREF="http://www.julesberman.info/captmaex.htm" target = "_top" >Arraying the data.</A> March, 2001. <li>Laura Lane. Tissue Microarrays Coming of Age. The Scientist. Volume 17, Issue 42, September 8, 2003. <br><A HREF="http://www.julesberman.info/scient.htm" target = "_top" >Excerpt</A>  <li>Stephanie De Ritis. Impact of information overload. Advance for Administrators of the Laboratory. pp. 24-27, October, 2003. <li>Eric Skjei. CAP Today Feature Story <br><A HREF="http://www.cap.org/apps/docs/cap_today/feature_stories/1103BringingOrder.html" target = "_top" > Bringing order to data chaos. </a> November, 2003. <br><a href="http://www.julesberman.info/bringing.htm" target = "_top" >Excerpt</a> <li>Ann Paxton. CAP Today Feature Story. <br><a href="http://www.cap.org/apps/docs/cap_today/feature_stories/0204Prostate.html" target = "_top" > Swinging for the fences with prostate cancer tissue bank, </a> February, 2004. <li>Laura Lane. The Scientist Feature Story. <br><a href="http://www.the-scientist.com/yr2004/mar/tools_040315.html" target = "_top" > TMA Buyers' Guide: Tissue microarrays come in various sizes and shapes; here's what you need to know before making your first purchase.</a> Volume 18, Issue 5, p 44, Mar. 15, 2004. <br> </ol> <hr> <br> Last modified: March 22, 2010 <br> <br> <center> <a href="http://www.julesberman.info/figs/all_book.htm" target = "_top" > <IMG width = "75%" alt="Books by Jules J. Berman, covers" SRC="http://www.julesberman.info/figs/bookthmb.jpg"> </a> </center> <br> <br>